Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015835956.1_cds_XP_016506115.1_19378
CDS Infomation

[gene=LOC107823916] [db_xref=GeneID:107823916] [protein=probable pectinesterase/pectinesterase inhibitor 20] [protein_id=XP_016506115.1] [location=complement(join(1449..2128,2979..3502,4132..4499))] [gbkey=CDS]
Sequence

ATGGCTAATGTTCGTTCATTACTTCCCGTTCTCATGCTTTTTTCCTTTTGCTTTCCAGCT
AATGCAATTTCCCCCTTGTCTTCAGAATCCTTTTGCAGCTACACACATTTCCCCGAATTT
TGCAAATACACGTTACCGATCAACAACTCTGCTACTATTCAAGATTATGGCCGTCTCTCT
CTTCACCATTCCTTATCAATGAATGACCATCTCCTTTCTTTGGTCAATGGCTATCTCTTT
AATCTTCGATATGCATTGCCTGAAAGCACCATTCGTGCCCTTGAAGATTGCCAACTTCTC
TGCAGCTTGAACCATGACTTTATTTTAAGCGCCATTCAATCCATCCATTCGACAAACACG
CTTGAAAGGTTACAAGCTGAAGACGTTCAACCTCTGCTAAGTGCCATACTAACCAACCAA
GAAACTTGTTCCGATGGTCTCAAAGAAGTAGCTGCTGGTACAAGCGTGACAAATATGCTT
CTATCTCCATTATCGGATGGGACCAAATCTTTTAGCGTTTCATTAGCACTTTTCATGCAT
GGTTGGGGTTATTCCGCCATATCAGAGAAGAAGTTTCCATTTTCTGGTGGAAGGAAACTG
CTTCAGTCAAATGAATATGGTGTGAATGTGAATCAAAGGGTGGTTGTGAATCCTGATGGA
AGTGGTAACTTCACAACTATTAATGAAGCTGTGGCTGCAGCTCCCAACTATACTGCTGCA
GGCAATGGTTATTTCTTGATTCATGTGGTGGCTGGTGTTTACGAAGAATATGTTTCCATT
CCCAGTAACAAACGGTATATTATGATGACGGGTGATGGGATCAACATGACTATTATTACT
GGAAACAGGAGTGTGGCTGATGGTTGGACTACATTTAATTCTGCTACATTTGCTGTAACC
GGGAAAGGCTTCGTTGCTATGAACATAACCTTTAGAAACACGGCAGGATCAATCAGGCAC
CAAGCGGTAGCTATAAGAAATGGTGCAGACATGTCCACATTTTATGGCTGTAACTTTGAA
GGGTACCAAGACACCTTGTATACTCACTCCCTAAGGCAATTTTATAGGGAATGCGATATT
TATGGGACAGTGGATTTCATATTCGGAAATGCCGCTGTAGTGCTCCAAAATTGCAACATT
TATCCGCGTCTCCCAATGCCTAATCAATTCAATGCCATTACAGCACAAGGCAGAACGGAT
ATCAATCAAAACACTGGAATTTCAGTTCAAAATTGCAGCATCAAAGCTGCCCAAGACTTG
GCTTCTACTCAAACTTTTCTAGGGAGGCCATGGAAAGAGTACTCGAGAACGGTGTATATA
CAATCATTTATGGACAGTTTGATTGATCCGTCTGGTTGGTCTCCATGGTCGGGAGATTTT
GCTCTCAATACATTGTATTATGCTGAGTATGCCAACACAGGGCCAGGGTCTGTGACTACT
AATAGAGTCACTTGGCAAGGCTACCATGTGATAAATGACACAGATGCTGTCAACTTCACT
GTTTCAAGTTTAATTCAAGGAGATGTTTGGTTGCCTGCAACTGGAGTTCCTTTTACTAGT
GGCTTACTTTGA

Peptide Sequence

PEP ID

XP_016506115.1
PEP Infomation

PREDICTED: probable pectinesterase/pectinesterase inhibitor 20 [Nicotiana tabacum]
Sequence

MANVRSLLPVLMLFSFCFPANAISPLSSESFCSYTHFPEFCKYTLPINNSATIQDYGRLS
LHHSLSMNDHLLSLVNGYLFNLRYALPESTIRALEDCQLLCSLNHDFILSAIQSIHSTNT
LERLQAEDVQPLLSAILTNQETCSDGLKEVAAGTSVTNMLLSPLSDGTKSFSVSLALFMH
GWGYSAISEKKFPFSGGRKLLQSNEYGVNVNQRVVVNPDGSGNFTTINEAVAAAPNYTAA
GNGYFLIHVVAGVYEEYVSIPSNKRYIMMTGDGINMTIITGNRSVADGWTTFNSATFAVT
GKGFVAMNITFRNTAGSIRHQAVAIRNGADMSTFYGCNFEGYQDTLYTHSLRQFYRECDI
YGTVDFIFGNAAVVLQNCNIYPRLPMPNQFNAITAQGRTDINQNTGISVQNCSIKAAQDL
ASTQTFLGRPWKEYSRTVYIQSFMDSLIDPSGWSPWSGDFALNTLYYAEYANTGPGSVTT
NRVTWQGYHVINDTDAVNFTVSSLIQGDVWLPATGVPFTSGLL

Transcript Sequence

Gene sequence data has not been registered.